Skip to content

Category Archives: journal watch

2014-07-05 New articles we read this week

Saturday, July 5, 2014

Systems biology Levo M, Segal E. In pursuit of design principles of regulatory sequences. Nat Rev Genet. 2014 Jul;15(7):453-68. doi: 10.1038/nrg3684. Epub 2014 Jun 10. PubMed PMID: 24913666. Patel AP, Tirosh I, Trombetta JJ, Shalek AK, Gillespie SM, Wakimoto H, Cahill DP, Nahed BV, Curry WT, Martuza RL, Louis DN, Rozenblatt-Rosen O, Suvà ML, Regev […]

Also filed in Fai's sharing | Tagged , , , , , , , , , , , , , , , , | Comments Off on 2014-07-05 New articles we read this week

2014-06-21 new articles we read this week

Saturday, June 21, 2014

Stem cells/ regenerative medicine Zhong X, Gutierrez C, Xue T, Hampton C, Vergara MN, Cao LH, Peters A, Park TS, Zambidis ET, Meyer JS, Gamm DM, Yau KW, Canto-Soler MV. Generation of three-dimensional retinal tissue with functional photoreceptors from human iPSCs. Nat Commun. 2014 Jun 10;5:4047. doi: 10.1038/ncomms5047. PubMed PMID: 24915161. Reichman S, Terray A, […]

Also filed in Fai's sharing | Tagged , , , , , , , , , , , , , , | Comments Off on 2014-06-21 new articles we read this week

2014-06-07 New articles we read this week

Saturday, June 7, 2014

Genome Editing Gagnon JA, Valen E, Thyme SB, Huang P, Ahkmetova L, Pauli A, Montague TG, Zimmerman S, Richter C, Schier AF. Efficient Mutagenesis by Cas9 Protein-Mediated Oligonucleotide Insertion and Large-Scale Assessment of Single-Guide RNAs. PLoS One. 2014 May 29;9(5):e98186. doi: 10.1371/journal.pone.0098186. eCollection 2014. PubMed PMID: 24873830. Hsu PD, Lander ES, Zhang F. Development and […]

Also filed in Fai's sharing | Tagged , , , , , , | Comments Off on 2014-06-07 New articles we read this week

2014-05-25 new articles we read this week

Sunday, May 25, 2014

Gene regulatory network Barsi JC, Tu Q, Davidson E. General approach for in vivo recovery of cell type specific effector gene sets. Genome Res. 2014 Mar 6. [Epub ahead of print] PubMed PMID: 24604781. Medicine Project to Improve Poor Children’s Intellect Led to Better Health, Data Show Begley CG, Ellis LM. Drug development: Raise standards […]

Also filed in Fai's sharing | Tagged , , , , , , , , , , , , , , , | Comments Off on 2014-05-25 new articles we read this week

2014-03-23 New articles we read this week

Sunday, March 23, 2014

Genomics Venter’s New Goal: World’s Largest Sequencing Operation Clinical Whole Genome Sequencing: Not Quite Ready for Prime Time? Genetics Vanderperre B, Lucier JF, Bissonnette C, Motard J, Tremblay G, Vanderperre S, Wisztorski M, Salzet M, Boisvert FM, Roucou X. Direct detection of alternative open reading frames translation products in human significantly expands the proteome. PLoS […]

Also filed in | Tagged , , , , , , , , , , , , , , , , , , , , , , , , , , | Comments Off on 2014-03-23 New articles we read this week

2012-02-26 New articles we read this week

Thursday, February 27, 2014

Genome editing Kim JM, Kim D, Kim S, Kim JS. Genotyping with CRISPR-Cas-derived RNA-guided endonucleases. Nat Commun. 2014 Jan 20;5:3157. doi: 10.1038/ncomms4157. PubMed PMID: 24445736. Bae S, Park J, Kim JS. Cas-OFFinder: A fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases. Bioinformatics. 2014 Jan 24. [Epub ahead of print] […]

Also filed in | Tagged , , , , , , , , , , , , | Comments Off on 2012-02-26 New articles we read this week

2014-01-30 New articles we read this week

Thursday, January 30, 2014

Stem cells A young scientist in Japan has found a simple approach to make totipotent stem cells by lowering the pH. Stimulus-triggered fate conversion of somatic cells into pluripotency. Nature Bidirectional developmental potential in reprogrammed cells with acquired pluripotency. Nature Cell biology: Potency unchained. Nature commentary BBC news: Stem cell ‘major discovery’ claimed Boston Globe: […]

Also filed in | Tagged , , , , , , , | Comments Off on 2014-01-30 New articles we read this week

2013-12-28 New articles we read this week

Saturday, December 28, 2013

Neuroscience Widmann A, Schröger E. Filter effects and filter artifacts in the analysis of  electrophysiological data. Front Psychol. 2012 Jul 9;3:233. doi: 10.3389/fpsyg.2012.00233. eCollection 2012. PubMed PMID: 22787453; PubMed Central PMCID: PMC3391960. Hsiao EY, McBride SW, Hsien S, Sharon G, Hyde ER, McCue T, Codelli JA, Chow J, Reisman SE, Petrosino JF, Patterson PH, Mazmanian SK. Microbiota modulate behavioral […]

Also filed in | Tagged , , , , , , , , , , , , , , , , , , , , , , | Comments Off on 2013-12-28 New articles we read this week

2013-10-12 New articles we read this week

Saturday, October 12, 2013

Genetics/Genomics Mali P, Esvelt KM, Church GM. Cas9 as a versatile tool for engineering biology. Nat Methods. 2013 Sep 27;10(10):957-63. doi: 10.1038/nmeth.2649. PubMed  PMID: 24076990. Esvelt KM, Mali P, Braff JL, Moosburner M, Yaung SJ, Church GM. Orthogonal Cas9 proteins for RNA-guided gene regulation and editing. Nat Methods. 2013 Sep 29. doi: 10.1038/nmeth.2681. [Epub ahead of print] PubMed […]

Also filed in | Tagged , , , , , , , , , , , , , | Comments Off on 2013-10-12 New articles we read this week

2013-09-03 new articles we read this week.

Tuesday, September 3, 2013

Genetics Xiao A, Wang Z, Hu Y, Wu Y, Luo Z, Yang Z, Zu Y, Li W, Huang P, Tong X, Zhu Z, Lin S, Zhang B. Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish. Nucleic Acids Res. 2013 Aug 1;41(14):e141.doi: 10.1093/nar/gkt464. Epub 2013 Jun 6. PubMed PMID: 23748566; PubMed Central PMCID: PMC3737551. Wei C, Liu […]

Also filed in | Tagged , , , , , , , , | Comments Off on 2013-09-03 new articles we read this week.