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Category Archives: Fai’s sharing

Fai’s scientific sharing with lab members

Cheap visual aid for people with poor vision

I have just come across an interesting approach to help patients with poor vision–using a smartphone app designed for augmenting vision with google cardboard. I first came across this approach through this youtube video. It shows how the approach helped a lady who suffered from Stargardt’s disease and could not see well for eight years. […]

2016-02-22 new articles we read this week

Genetics Gage SH, Davey Smith G, Ware JJ, Flint J, Munafò MR. G = E: What GWAS Can Tell Us about the Environment. PLoS Genet. 2016 Feb 11;12(2):e1005765. doi: 10.1371/journal.pgen.1005765. eCollection 2016 Feb. PubMed PMID: 26866486. Murray A. Salvador Luria and Max Delbrück on Random Mutation and Fluctuation Tests. Genetics. 2016 Feb;202(2):367-8. doi: 10.1534/genetics.115.186163. PubMed […]

2016-02-15 new articles we read this week

Scientific publishing Gibney E. Open journals that piggyback on arXiv gather momentum. Nature. 2016 Feb 4;530(7588):117-8. PubMed PMID: 26854297. Genome editing Wu B, Luo L, Gao XJ. Cas9-triggered chain ablation of cas9 as a gene drive brake. Nat Biotechnol. 2016 Feb 5;34(2):137-8. doi: 10.1038/nbt.3444. PubMed PMID: 26849513. Alphey L. Can CRISPR-Cas9 gene drives curb malaria? […]

2016-02-08 new articles we read this week

Genomics Shen SQ, Myers CA, Hughes AE, Byrne LC, Flannery JG, Corbo JC. Massively parallel cis-regulatory analysis in the mammalian central nervous system. Genome Res. 2016 Feb;26(2):238-55. doi: 10.1101/gr.193789.115. Epub 2015 Nov 17. PubMed PMID: 26576614. Quick J, et al., . Real-time, portable genome sequencing for Ebola surveillance. Nature. 2016 Feb 3. doi: 10.1038/nature16996. [Epub […]

2016-02-01 new articles we read this week

Molecular Biology Weingarten-Gabbay S, Elias-Kirma S, Nir R, Gritsenko AA, Stern-Ginossar N, Yakhini Z, Weinberger A, Segal E. Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes. Science. 2016 Jan 15;351(6270). pii: aad4939. doi: 10.1126/science.aad4939. Epub 2016 Jan 14. PubMed PMID: 26816383. Bernecky C, Herzog F, Baumeister W, Plitzko JM, Cramer […]

2016-01-25 new articles we read this week

Eye diseases Bailey JN, Loomis SJ, Kang JH, Allingham RR, Gharahkhani P, Khor CC, Burdon KP, Aschard H, Chasman DI, Igo RP Jr, Hysi PG, Glastonbury CA, Ashley-Koch A, Brilliant M, Brown AA, Budenz DL, Buil A, Cheng CY, Choi H, Christen WG, Curhan G, De Vivo I, Fingert JH, Foster PJ, Fuchs C, Gaasterland […]

2016-01-18 new articles we read this week

Genome editing Whitworth KM, Rowland RR, Ewen CL, Trible BR, Kerrigan MA, Cino-Ozuna AG, Samuel MS, Lightner JE, McLaren DG, Mileham AJ, Wells KD, Prather RS. Gene-edited pigs are protected from porcine reproductive and respiratory syndrome virus. Nat Biotechnol. 2016 Jan;34(1):20-2. doi: 10.1038/nbt.3434. Epub 2015 Dec 7. PubMed PMID: 26641533. Hammond A, Galizi R, Kyrou […]

2016-01-11 new articles we read this week

Development Eom DS, Bain EJ, Patterson LB, Grout ME, Parichy DM. Long-distance communication by specialized cellular projections during pigment pattern development and evolution. Elife. 2015 Dec 23;4. pii: e12401. doi: 10.7554/eLife.12401. [Epub ahead of print] PubMed PMID: 26701906. Stem cells Shirai H, Mandai M, Matsushita K, Kuwahara A, Yonemura S, Nakano T, Assawachananont J, Kimura […]

2016-01-04 new articles we read this week

Eye disease Fritsche LG, et al. A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants. Nat Genet. 2015 Dec 21. doi: 10.1038/ng.3448. [Epub ahead of print] PubMed PMID: 26691988. Zebrafish Behaviour Prykhozhij SV, Rajan V, Berman JN. A Guide to Computational Tools and Design Strategies for Genome Editing […]

When you are away for Christmas 2015

Something happens to the office… just like 2012, 2013 and 2014 (office left-right flipped) …