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2012-03-24 new articles we read this week

Development

  1. Vogel G. Reproductive biology. Potential egg stem cells reignite debate. Science. 2012 Mar 2;335(6072):1029-30. PubMed PMID: 22383817.

Scientific career

  1. Mervis J. Scientific careers. Is motherhood the biggest reason for academia’s gender imbalance? Science. 2012 Mar 2;335(6072):1030-1. PubMed PMID: 22383818.

Genomics

  1. Xu X, Hou Y, Yin X, Bao L, Tang A, Song L, Li F, Tsang S, Wu K, Wu H, He W, Zeng L, Xing M, Wu R, Jiang H, Liu X, Cao D, Guo G, Hu X, Gui Y, Li Z, Xie W, Sun X, Shi M, Cai Z, Wang B, Zhong M, Li J, Lu Z, Gu N, Zhang X, Goodman L, Bolund L, Wang J, Yang H, Kristiansen K, Dean M, Li Y, Wang J. Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor. Cell. 2012 Mar 2;148(5):886-95. PubMed PMID: 22385958.
  2. Hou Y, Song L, Zhu P, Zhang B, Tao Y, Xu X, Li F, Wu K, Liang J, Shao D, Wu H, Ye X, Ye C, Wu R, Jian M, Chen Y, Xie W, Zhang R, Chen L, Liu X, Yao X, Zheng H, Yu C, Li Q, Gong Z, Mao M, Yang X, Yang L, Li J, Wang W, Lu Z, Gu N, Laurie G, Bolund L, Kristiansen K, Wang J, Yang H, Li Y, Zhang X, Wang J. Single-Cell ExomeSequencing and Monoclonal Evolution of a JAK2-Negative Myeloproliferative Neoplasm. Cell. 2012 Mar 2;148(5):873-85. PubMed PMID: 22385957.

Systems biology

  1. Angermann BR, Klauschen F, Garcia AD, Prustel T, Zhang F, Germain RN, Meier-Schellersheim M. Computational modeling of cellular signaling processes embedded into dynamic spatial contexts. Nat Methods. 2012 Jan 29;9(3):283-9. doi: 10.1038/nmeth.1861. PubMed PMID: 22286385.
    • Commentary: Sneddon MW, Emonet T. Modeling cellular signaling: taking space into the computation. Nat Methods. 2012 Feb 28;9(3):239-42. doi: 10.1038/nmeth.1900. PubMed PMID: 22373909.

Imaging

  1. Allan C, Burel JM, Moore J, Blackburn C, Linkert M, Loynton S, Macdonald D, Moore WJ, Neves C, Patterson A, Porter M, Tarkowska A, Loranger B, Avondo J, Lagerstedt I, Lianas L, Leo S, Hands K, Hay RT, Patwardhan A, Best C, Kleywegt GJ, Zanetti G, Swedlow JR. OMERO: flexible, model-driven data management for experimental biology. Nat Methods. 2012 Feb 28;9(3):245-53. doi: 10.1038/nmeth.1896. PubMed PMID: 22373911.
  2. Ragan T, Kadiri LR, Venkataraju KU, Bahlmann K, Sutin J, Taranda J, Arganda-Carreras I, Kim Y, Seung HS, Osten P. Serial two-photon tomography for automated ex vivo mouse brain imaging. Nat Methods. 2012 Jan 15;9(3):255-8. doi:  10.1038/nmeth.1854. PubMed PMID: 22245809; PubMed Central PMCID: PMC3297424

Genetics

  1. Wang X, Chen X, Yang Y. Spatiotemporal control of gene expression by a light-switchable transgene system. Nat Methods. 2012 Feb 12;9(3):266-9. doi: 10.1038/nmeth.1892. PubMed PMID: 22327833.