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2011-03-05 new articles we read this week

Microbiology

  1. Dubey GP, Ben-Yehuda S. Intercellular nanotubes mediate bacterial communication. Cell. 2011 Feb 18;144(4):590-600. PubMed PMID: 21335240.
    • A new way of bacterial communication is discovered.

Genetics/ Genomics

  1. Takashima Y, Ohtsuka T, González A, Miyachi H, Kageyama R. Intronic delay is essential for oscillatory expression in the segmentation clock. Proc Natl Acad Sci U S A. 2011 Feb 7. [Epub ahead of print] PubMed PMID: 21300886.
  2. Nikolova EN, Kim E, Wise AA, O’Brien PJ, Andricioaei I, Al-Hashimi HM. Transient Hoogsteen base pairs in canonical duplex DNA. Nature. 2011 Feb 24;470(7335):498-502. Epub 2011 Jan 26. PubMed PMID: 21270796.
    • Commentary: Honig B, Rohs R. Biophysics: Flipping Watson and Crick. Nature. 2011 Feb 24;470(7335):472-3. PubMed PMID: 21350476.
    • A possible 3D configuration of DNA is in equilibrium with the regular DNA, thus expanding the variety of the possible DNA recognition.
  3. Kedes L, Liu E, Jongeneel CV, Sutton G. Judging the Archon Genomics X PRIZE for whole human genome sequencing. Nat Genet. 2011 Mar;43(3):175. PubMed PMID: 21350493.
  4. Towards a medical grade human genome sequence. Nat Genet. 2011 Mar;43(3):173.  PubMed PMID: 21350492.

Development

  1. Manceau M, Domingues VS, Mallarino R, Hoekstra HE. The developmental role of Agouti in color pattern evolution. Science. 2011 Feb 25;331(6020):1062-5. PubMedPMID: 21350176.

Retinal development

  1. Kerschensteiner D. Circuit assembly: the repulsive side of lamination. Curr Biol. 2011 Feb 22;21(4):R163-6. PubMed PMID: 21334299.
  2. Whitney IE, Raven MA, Lu L, Williams RW, Reese BE. A QTL on Chromosome 10 Modulates Cone Photoreceptor Number in the Mouse Retina. Invest Ophthalmol Vis Sci. 2011 Feb 17. [Epub ahead of print] PubMed PMID: 21330668.

Neurodevelopment

  • A series of brainbow applications and modifications!
  1. Card JP, Kobiler O, McCambridge J, Ebdlahad S, Shan Z, Raizada MK, Sved AF, Enquist LW. Microdissection of neural networks by conditional reporter expression from a Brainbow herpesvirus. Proc Natl Acad Sci U S A. 2011 Feb 3. [Epub ahead of print] PubMed PMID: 21292985.
  2. Cachero S, Jefferis GS. Double brainbow. Nat Methods. 2011 Mar;8(3):217-8. PubMed PMID: 21358624.
  3. Hampel S, Chung P, McKellar CE, Hall D, Looger LL, Simpson JH. Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns. Nat Methods. 2011 Mar;8(3):253-9. Epub 2011 Feb 6. PubMed PMID: 21297621.
  4. Hadjieconomou D, Rotkopf S, Alexandre C, Bell DM, Dickson BJ, Salecker I. Flybow: genetic multicolor cell labeling for neural circuit analysis in Drosophila melanogaster. Nat Methods. 2011 Mar;8(3):260-6. Epub 2011 Feb 6. PubMed PMID: 21297619.

Regeneration

  1. Porrello ER, Mahmoud AI, Simpson E, Hill JA, Richardson JA, Olson EN, Sadek HA. Transient regenerative potential of the neonatal mouse heart. Science. 2011 Feb 25;331(6020):1078-80. PubMed PMID: 21350179.

Cdk5

  1. Sato K, Minegishi S, Takano J, Plattner F, Saito T, Asada A, Kawahara H, Iwata N, Saido TC, Hisanaga SI. Calpastatin, an endogenous calpain-inhibitor protein, regulates the cleavage of the Cdk5 activator p35 to p25. J Neurochem. 2011 Feb 21. doi: 10.1111/j.1471-4159.2011.07222.x. [Epub ahead of print] PubMed PMID: 21338355.

Ethical, Social and Legal Issues

  1. Ceci SJ, Williams WM. Understanding current causes of women’s underrepresentation in science. Proc Natl Acad Sci U S A. 2011 Feb 7. [Epub ahead of print] PubMed PMID: 21300892.
  2. Muggah R. Measuring the true costs of war: consensus and controversy. PLoS Med. 2011 Feb 15;8(2):e1000417. PubMed PMID: 21358809; PubMed Central PMCID: PMC3039686.
  3. Hicks MH, Dardagan H, Guerrero Serdán G, Bagnall PM, Sloboda JA, Spagat M. Violent deaths of iraqi civilians, 2003-2008: analysis by perpetrator, weapon, time, and location. PLoS Med. 2011 Feb 15;8(2):e1000415. PubMed PMID: 21358813; PubMed Central PMCID: PMC3039690.

Research Funding

  1. Cho A. U.S. science budget. House cuts to DOE national labs would also hamstring industry. Science. 2011 Feb 25;331(6020):997-8. PubMed PMID: 21350135.